Quick Context: We demonstrate how to find an example of a hydrophobic interaction and confirm that it is a hydrophobic interaction by measuring ... In this example we will be looking at an SH2 domain and how it binds a peptide with a phosphorylated tyrosine.

Icn3d Demonstration -

We demonstrate how to find an example of a hydrophobic interaction and confirm that it is a hydrophobic interaction by measuring ... In this example we will be looking at an SH2 domain and how it binds a peptide with a phosphorylated tyrosine. This shows how to color each atom by element and label the atoms with the one letter code for the element.

Important details found

  • We demonstrate how to find an example of a hydrophobic interaction and confirm that it is a hydrophobic interaction by measuring ...
  • In this example we will be looking at an SH2 domain and how it binds a peptide with a phosphorylated tyrosine.
  • This shows how to color each atom by element and label the atoms with the one letter code for the element.
  • This tutorial demonstrates a simple procedure for modeling an active site in

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Image References

iCn3D demo
iCn3D demonstration
Visualizing ACE2 and SARS-CoV2 spike protein in iCn3D(NCBI) for BIOL112
iCn3D Tutorial: Active Site Modeling
iCn3D basics
Making an element color key in iCn3D
Using iCn3D to explore a protein structure
iCn3D Viewer Tutorial, Part 1
Using iCn3D to identify amino acids by charge
Finding and identifying hydrophobic interactions in iCn3D
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iCn3D demo

iCn3D demo

Presenter: Dr. Jiyao Wang, NCBI. You can download the slides here: ...

iCn3D demonstration

iCn3D demonstration

Read more details and related context about iCn3D demonstration.

Visualizing ACE2 and SARS-CoV2 spike protein in iCn3D(NCBI) for BIOL112

Visualizing ACE2 and SARS-CoV2 spike protein in iCn3D(NCBI) for BIOL112

Read more details and related context about Visualizing ACE2 and SARS-CoV2 spike protein in iCn3D(NCBI) for BIOL112.

iCn3D Tutorial: Active Site Modeling

iCn3D Tutorial: Active Site Modeling

This tutorial demonstrates a simple procedure for modeling an active site in

iCn3D basics

iCn3D basics

Read more details and related context about iCn3D basics.

Making an element color key in iCn3D

Making an element color key in iCn3D

This shows how to color each atom by element and label the atoms with the one letter code for the element.

Using iCn3D to explore a protein structure

Using iCn3D to explore a protein structure

In this example we will be looking at an SH2 domain and how it binds a peptide with a phosphorylated tyrosine. The structure has ...

iCn3D Viewer Tutorial, Part 1

iCn3D Viewer Tutorial, Part 1

Read more details and related context about iCn3D Viewer Tutorial, Part 1.

Using iCn3D to identify amino acids by charge

Using iCn3D to identify amino acids by charge

Read more details and related context about Using iCn3D to identify amino acids by charge.

Finding and identifying hydrophobic interactions in iCn3D

Finding and identifying hydrophobic interactions in iCn3D

We demonstrate how to find an example of a hydrophobic interaction and confirm that it is a hydrophobic interaction by measuring ...